GoatVar

Sample Information Table

Wild Samples

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No.	Sample ID	Gender	Sample origin place	Species	Common name	Mapping rate	Depth	3X coverage	SNP number	Homozygous variants number	Heterozygous variants number	Accession number	BioProject
1	SRR8437785	female	Spain	C.pyrenaica	Iberian ibex	99.83%	17.98	91.78%	18,943,833	14,813,454	4,130,379	SRR8437785	PRJNA514886
2	SRR8437787	male	Spain	C.pyrenaica	Iberian ibex	91.52%	16.21	91.69%	18,800,145	14,728,443	4,071,702	SRR8437787	PRJNA514886
3	SRR8437788	male	Spain	C.pyrenaica	Iberian ibex	94.59%	16.38	91.78%	18,828,971	14,878,127	3,950,844	SRR8437788	PRJNA514886
4	SRR8437790	male	Spain	C.pyrenaica	Iberian ibex	99.81%	27.76	92.42%	19,343,557	15,013,279	4,330,278	SRR8437790	PRJNA514886
5	RS1	female	European Alps	C.ibex	Alpine ibex	99.59%	10.08	89.99%	14,946,935	14,014,603	932,332	SRR5803190	PRJNA387635
6	SRR8437774	female	European Alps	C.ibex	Alpine ibex	99.81%	18.18	91.14%	18,458,976	14,918,290	3,540,686	SRR8437774	PRJNA514886
7	SRR8437775	female	European Alps	C.ibex	Alpine ibex	99.84%	20.34	91.48%	18,953,912	14,938,122	4,015,790	SRR8437775	PRJNA514886
8	SRR8437776	female	European Alps	C.ibex	Alpine ibex	99.73%	22.02	91.62%	19,158,371	14,989,021	4,169,350	SRR8437776	PRJNA514886
9	SRR8437777	female	European Alps	C.ibex	Alpine ibex	99.85%	18.92	91.48%	18,438,927	14,838,397	3,600,530	SRR8437777	PRJNA514886
10	SRR8437780	male	European Alps	C.ibex	Alpine ibex	99.78%	17.77	91.37%	18,421,436	14,723,205	3,698,231	SRR8437780	PRJNA514886
11	SRR8437781	female	European Alps	C.ibex	Alpine ibex	99.82%	19.41	91.28%	18,458,271	14,908,140	3,550,131	SRR8437781	PRJNA514886
12	SRR8437782	male	European Alps	C.ibex	Alpine ibex	99.84%	17.60	91.71%	18,426,916	14,788,294	3,638,622	SRR8437782	PRJNA514886
13	SRR8437783	male	European Alps	C.ibex	Alpine ibex	99.80%	19.01	91.69%	18,451,923	14,838,183	3,613,740	SRR8437783	PRJNA514886
14	SRR8437791	male	European Alps	C.ibex	Alpine ibex	99.39%	17.38	91.72%	18,420,931	14,722,284	3,698,647	SRR8437791	PRJNA514886
15	SRR8437793	male	European Alps	C.ibex	Alpine ibex	99.78%	17.81	91.79%	18,428,173	14,738,186	3,689,987	SRR8437793	PRJNA514886
16	SRR8437794	male	European Alps	C.ibex	Alpine ibex	99.85%	17.63	91.71%	18,426,926	14,732,215	3,694,711	SRR8437794	PRJNA514886
17	SRR8437795	male	European Alps	C.ibex	Alpine ibex	99.88%	18.12	91.71%	18,438,930	14,808,690	3,630,240	SRR8437795	PRJNA514886
18	SRR8437796	female	European Alps	C.ibex	Alpine ibex	99.87%	19.30	91.54%	18,452,813	14,910,014	3,542,799	SRR8437796	PRJNA514886
19	SRR8437797	male	European Alps	C.ibex	Alpine ibex	99.83%	17.22	91.55%	18,425,689	14,758,274	3,667,415	SRR8437797	PRJNA514886
20	SRR8437798	male	European Alps	C.ibex	Alpine ibex	99.75%	16.91	91.66%	18,420,573	14,708,147	3,712,426	SRR8437798	PRJNA514886
21	SRR8437799	male	European Alps	C.ibex	Alpine ibex	99.81%	20.32	91.81%	18,460,912	14,922,347	3,538,565	SRR8437799	PRJNA514886
22	SRR8437800	female	European Alps	C.ibex	Alpine ibex	99.27%	17.29	91.46%	18,430,176	14,768,290	3,661,886	SRR8437800	PRJNA514886
23	SRR8437801	female	European Alps	C.ibex	Alpine ibex	99.74%	17.97	91.47%	18,430,378	14,782,871	3,647,507	SRR8437801	PRJNA514886
24	SRR8437802	female	European Alps	C.ibex	Alpine ibex	99.76%	19.18	91.49%	18,449,976	14,898,339	3,551,637	SRR8437802	PRJNA514886
25	SRR8437803	female	European Alps	C.ibex	Alpine ibex	99.53%	19.38	91.52%	18,449,912	14,821,342	3,628,570	SRR8437803	PRJNA514886
26	SRR8437804	male	European Alps	C.ibex	Alpine ibex	99.71%	19.88	91.94%	18,451,023	14,848,019	3,603,004	SRR8437804	PRJNA514886
27	SRR8437805	female	European Alps	C.ibex	Alpine ibex	99.70%	18.12	91.27%	18,448,876	14,712,994	3,735,882	SRR8437805	PRJNA514886
28	SRR8437806	female	European Alps	C.ibex	Alpine ibex	98.33%	19.19	91.33%	18,449,900	14,886,187	3,563,713	SRR8437806	PRJNA514886
29	SRR8437807	male	European Alps	C.ibex	Alpine ibex	99.65%	19.39	91.56%	18,448,821	14,825,818	3,623,003	SRR8437807	PRJNA514886
30	SRR8437808	male	European Alps	C.ibex	Alpine ibex	99.78%	20.16	91.74%	18,458,912	14,924,295	3,534,617	SRR8437808	PRJNA514886
31	SRR8437809	male	European Alps	C.ibex	Alpine ibex	99.60%	17.82	91.76%	18,431,396	14,738,482	3,692,914	SRR8437809	PRJNA514886
32	SRR8437810	male	European Alps	C.ibex	Alpine ibex	99.65%	19.07	91.90%	18,449,172	14,883,291	3,565,881	SRR8437810	PRJNA514886
33	SRR8437811	male	European Alps	C.ibex	Alpine ibex	99.28%	20.09	91.90%	18,459,245	14,931,814	3,527,431	SRR8437811	PRJNA514886
34	SRR8437812	female	European Alps	C.ibex	Alpine ibex	99.75%	18.79	91.53%	18,431,907	14,798,893	3,633,014	SRR8437812	PRJNA514886
35	SRR8437789	male	North Africa, East Africa	C.nubiana	Nubian ibex	99.62%	20.00	92.79%	18,246,902	14,948,195	3,298,707	SRR8437789	PRJNA514886
36	SRR8437792	male	North Africa, East Africa	C.nubiana	Nubian ibex	98.67%	19.69	92.97%	18,208,917	14,901,266	3,307,651	SRR8437792	PRJNA514886
37	BS5	female	Central Asia and China	C.sibirica	Siberian ibex	97.20%	9.75	90.78%	17,260,145	13,760,875	3,499,270	SRR5803192	PRJNA387635
38	BS8	female	Central Asia and China	C.sibirica	Siberian ibex	94.87%	12.31	91.90%	17,564,840	13,451,003	4,113,837	SRR5803193	PRJNA387635
39	BSY	male	Central Asia and China	C.sibirica	Siberian ibex	99.84%	47.43	95.09%	18,448,986	13,914,991	4,533,995	SRR5260680	PRJNA361447
40	SRR8437784	male	Central Asia and China	C.sibirica	Siberian ibex	99.57%	23.34	92.83%	17,963,820	13,658,015	4,305,805	SRR8437784	PRJNA514886
41	SRR8437786	male	Central Asia and China	C.sibirica	Siberian ibex	99.47%	16.75	92.27%	17,664,530	13,553,090	4,111,440	SRR8437786	PRJNA514886
42	SRR8437778	male	Pakistan, Afghanistan, Central Asia	C.falconeri	Markhor	99.57%	43.34	94.16%	18,972,540	13,720,614	5,251,926	SRR8437778	PRJNA514886
43	TB201402	male	Pakistan, Afghanistan, Central Asia	C.falconeri	Markhor	96.53%	8.94	87.44%	17,528,518	13,344,279	4,184,239	SRR5803200	PRJNA387635
44	TB201404	male	Pakistan, Afghanistan, Central Asia	C.falconeri	Markhor	96.26%	27.60	93.19%	18,822,547	13,508,682	5,313,865	SRR5803207	PRJNA387635
45	TB201405	male	Pakistan, Afghanistan, Central Asia	C.falconeri	Markhor	97.88%	10.40	89.29%	18,332,587	13,487,789	4,844,798	SRR5803204	PRJNA387635
46	Tur1	male	Caucasus	C.caucasica	West Caucasian tur	100%	3.36	53.05%	10,192,741	5,292,453	4,900,288	SRR8618143	PRJNA387635

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