Schema for expreBar - expreBar |
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Database: BosGru3_0 Primary Table: expreBar Data last updated: 2021-06-14
Big Bed File: /gbdb/BosGru3_0/trans/bigBarChart/yak/output.bigBed
Item Count: 28,129
Format description: Tissue expreBar
| field | example | description |
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| chrom | 1 | Reference sequence chromosome or scaffold | | chromStart | 115098559 | Start position of feature on chromosome | | chromEnd | 115098630 | End position of feature on chromosome | | name | TRNAW-CCA.17 | Name of transcript | | score | 0 | Score | | strand | . | + or - for strand | | name2 | TRNAW-CCA | Name of gene | | expCount | 31 | Number of tissues | | expScores | 0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0 | Comma separated list of median expression in FPKM for each tissue. | | _dataOffset | 12458550 | Offset of sample data in data matrix file | | _dataLen | 453 | Length of sample data row in data matrix file |
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Sample Rows
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| chrom | chromStart | chromEnd | name | score | strand | name2 | expCount | expScores | _dataOffset | _dataLen |
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| 1 | 115098559 | 115098630 | TRNAW-CCA.17 | 0 | . | TRNAW-CCA | 31 | 0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0 | 12458550 | 453 |
| 1 | 115200287 | 115231917 | OTOL1 | 111 | . | OTOL1 | 31 | 0.01,0.01,0.0,0.01,0.03,0.0,0.0,0.03,0.04,0.04,0.01,0.0,0.12,0.0,0.01,0.28,0.0,0.0,0.0,0.01,0.00,0.01,0.0,0.09,0.02,0.02,0.02,0. ... | 12462323 | 446 |
| 1 | 115359005 | 115390685 | SPTSSB | 555 | . | SPTSSB | 31 | 0.23,1.20,22.08,0.10,2.42,0.72,0.35,1.89,1.15,6.11,1.60,1.54,6.62,0.17,0.10,0.26,0.19,0.16,0.04,0.17,0.0,0.00,0.1,0.66,0.58,0.08 ... | 12471436 | 450 |
| 1 | 115507723 | 115547794 | NMD3 | 777 | . | NMD3 | 31 | 8.0,5.05,9.28,9.23,11.91,14.41,5.22,7.77,11.99,13.70,13.59,7.15,12.0,10.93,5.41,9.35,4.25,7.31,9.36,12.99,13.66,13.91,5.27,18.05 ... | 12485072 | 488 |
| 1 | 115728775 | 115763958 | B3GALNT1 | 666 | . | B3GALNT1 | 31 | 1.93,0.06,7.57,0.09,5.20,4.46,1.52,4.09,3.19,4.94,2.4,0.96,10.21,1.09,0.85,7.58,2.37,2.02,29.48,18.29,0.99,0.85,1.8,13.04,15.77, ... | 12490185 | 472 |
| 1 | 115785859 | 116150708 | PPM1L | 666 | . | PPM1L | 31 | 1.64,2.16,0.91,0.67,0.73,1.32,1.17,1.55,1.96,2.99,1.56,2.49,2.49,28.26,21.11,9.49,21.88,15.84,8.05,11.41,0.10,0.17,0.63,1.99,2.6 ... | 12493439 | 465 |
| 1 | 115857203 | 115857844 | LOC112447732 | 111 | . | LOC112447732 | 31 | 0.03,0.01,0.0,0.0,0.1,0.0,0.0,0.0,0.42,0.0,0.03,0.03,0.0,0.01,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.1,0.0,0.0,0.06,0.04,0.0,0.0,0.0, ... | 12498089 | 453 |
| 1 | 116138301 | 116141500 | LOC104970982 | 333 | . | LOC104970982 | 31 | 0.04,0.16,0.0,0.0,0.0,0.03,0.0,0.1,0.56,1.11,0.35,0.0,0.24,0.70,2.29,1.29,2.79,6.21,0.78,1.12,0.0,0.0,0.0,0.64,0.71,1.14,0.0,0.3 ... | 12506373 | 453 |
| 1 | 116262566 | 116265151 | ARL14 | 111 | . | ARL14 | 31 | 0.0,0.01,0.0,0.01,0.01,0.02,0.0,0.00,0.01,0.03,0.04,0.00,0.0,0.0,0.00,0.01,0.0,0.00,0.01,0.00,0.0,0.0,0.05,0.09,0.03,0.03,0.03,0 ... | 12519214 | 446 |
| 1 | 116363266 | 116429485 | KPNA4 | 999 | . | KPNA4 | 31 | 30.39,10.32,45.85,24.28,29.59,33.59,19.81,31.14,38.50,35.51,32.23,18.75,27.61,46.26,87.44,40.45,52.29,66.92,38.43,58.99,35.68,34 ... | 12524635 | 529 |
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