Schema for NCBI Genes - NCBI Gene Predictions for chicken(GRCg6a)
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Database: GRCg6a Primary Table: NCBI_Genes Data last updated: 2019-09-16
Big Bed File: /gbdb/GRCg6a/gene/GRCg6a.gene.bb Item Count: 62,911
Format description: Genes for Chicken with Transcript and GeneSymbol
field | example | description |
chrom | 1 | Reference sequence chromosome or scaffold (GRCg6a: GCF_000002315.6) | chromStart | 131681531 | Start position in chromosome | chromEnd | 131744884 | End position in chromosome | name | XM_015277764.2 | Name of transcript | score | 0 | Score from 0-1000 | strand | + | + or - for strand | thickStart | 131694170 | Start of where display should be thick (start codon) | thickEnd | 131744443 | End of where display should be thick (stop codon) | reserved | 0 | Used as itemRgb as of 2004-11-22 | blockCount | 31 | Number of exon | blockSizes | 24,124,90,78,102,182,97,129,105,92,118,123,126,167,148,154,157,97,77,109,120,200,88,144,91,131,73,95,239,148,606, | Comma separated list of exon sizes | chromStarts | 0,12632,12919,13555,14307,15821,16679,16912,17671,17969,19149,20370,21746,22167,23345,25347,26717,27488,27932,28094,28779,31013,37606,47221,49193,56804,58586,59772,61080,62175,62747, | Start positions relative to chromStart | geneSymbol | CYFIP1 | Gene Symbol | searchText | XM_015277764.2(CYFIP1) | Search Text |
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Sample Rows
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chrom | chromStart | chromEnd | name | score | strand | thickStart | thickEnd | reserved | blockCount | blockSizes | chromStarts | geneSymbol | searchText |
1 | 131681531 | 131744884 | XM_015277764.2 | 0 | + | 131694170 | 131744443 | 0 | 31 | 24,124,90,78,102,182,97,129,105,92,118,123,126,167,148,154,157,97,77,109,120,200,88,144,91,131,73,95,239,148,606, | 0,12632,12919,13555,14307,15821,16679,16912,17671,17969,19149,20370,21746,22167,23345,25347,26717,27488,27932,28094,28779,31013, ... | CYFIP1 | XM_015277764.2(CYFIP1) |
1 | 131682067 | 131744884 | XM_004938458.3 | 0 | + | 131694170 | 131744443 | 0 | 31 | 151,124,90,78,102,182,97,129,105,92,118,123,126,167,148,148,157,97,77,109,120,200,88,144,91,131,73,95,239,148,606, | 0,12096,12383,13019,13771,15285,16143,16376,17135,17433,18613,19834,21210,21631,22809,24365,26181,26952,27396,27558,28243,30477, ... | CYFIP1 | XM_004938458.3(CYFIP1) |
1 | 131682067 | 131745200 | XM_003640523.4 | 0 | + | 131694170 | 131744443 | 0 | 31 | 151,124,90,78,102,182,97,129,105,92,118,123,126,167,148,154,157,97,77,109,120,200,88,144,91,131,73,95,239,148,922, | 0,12096,12383,13019,13771,15285,16143,16376,17135,17433,18613,19834,21210,21631,22809,24811,26181,26952,27396,27558,28243,30477, ... | CYFIP1 | XM_003640523.4(CYFIP1) |
1 | 131746786 | 131757444 | XM_015277708.2 | 0 | - | 131747124 | 131751073 | 0 | 8 | 976,161,91,57,223,61,57,177, | 0,1372,2119,2658,4148,4695,8585,10481, | NIPA2 | XM_015277708.2(NIPA2) |
1 | 131746786 | 131757836 | XM_015277707.2 | 0 | - | 131747124 | 131751073 | 0 | 8 | 976,161,91,57,223,61,57,274, | 0,1372,2119,2658,4148,4695,8585,10776, | NIPA2 | XM_015277707.2(NIPA2) |
1 | 131747124 | 131751073 | NM_001030809.1 | 0 | - | 131747124 | 131751073 | 0 | 5 | 638,161,91,57,139, | 0,1034,1781,2320,3810, | NIPA2 | NM_001030809.1(NIPA2) |
1 | 131761288 | 131775936 | XM_015277766.2 | 0 | - | 131765746 | 131775877 | 0 | 5 | 4970,161,91,48,219, | 0,6292,7636,11438,14429, | NIPA1 | XM_015277766.2(NIPA1) |
1 | 131796739 | 131802824 | XR_001463981.2 | 0 | + | 131802824 | 131802824 | 0 | 3 | 86,102,796, | 0,3374,5289, | LOC107051964 | XR_001463981.2(LOC107051964) |
1 | 131806219 | 131911397 | XM_015277711.2 | 0 | + | 131806805 | 131910662 | 0 | 93 | 56,117,115,138,220,101,157,111,172,174,189,152,158,114,252,194,201,229,125,179,185,156,186,171,104,151,215,133,128,196,137,174,1 ... | 0,541,10402,16002,25713,28164,29073,30029,30443,31224,31997,32754,34196,34763,36218,37286,38028,38933,39233,40725,41639,41934,42 ... | HERC2 | XM_015277711.2(HERC2) |
1 | 131806219 | 131911397 | XM_015277712.2 | 0 | + | 131806805 | 131910662 | 0 | 93 | 56,117,115,138,220,101,142,111,172,174,189,152,158,114,252,194,201,229,125,179,185,156,186,171,104,151,215,133,128,196,137,174,1 ... | 0,541,10402,16002,25713,28164,29073,30029,30443,31224,31997,32754,34196,34763,36218,37286,38028,38933,39233,40725,41639,41934,42 ... | HERC2 | XM_015277712.2(HERC2) |
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