Schema for expreBar - expreBar |
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Database: Oar_rambouillet_v1_0_addY Primary Table: expreBar Data last updated: 2021-06-15
Big Bed File: /gbdb/Oar_rambouillet_v1_0_addY/trans/bigBarChart/sheep/output.bigBed
Item Count: 23,981
Format description: Tissue expreBar
| field | example | description |
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| chrom | 1 | Reference sequence chromosome or scaffold | | chromStart | 201581796 | Start position of feature on chromosome | | chromEnd | 201581867 | End position of feature on chromosome | | name | TRNAS-GGA.8 | Name of transcript | | score | 0 | Score | | strand | . | + or - for strand | | name2 | TRNAS-GGA | Name of gene | | expCount | 80 | Number of tissues | | expScores | 0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0 | Comma separated list of median expression in FPKM for each tissue. | | _dataOffset | 6927879 | Offset of sample data in data matrix file | | _dataLen | 4172 | Length of sample data row in data matrix file |
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Sample Rows
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| chrom | chromStart | chromEnd | name | score | strand | name2 | expCount | expScores | _dataOffset | _dataLen |
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| 1 | 201581796 | 201581867 | TRNAS-GGA.8 | 0 | . | TRNAS-GGA | 80 | 0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0, ... | 6927879 | 4172 |
| 1 | 201789194 | 201809469 | IGSF11 | 333 | . | IGSF11 | 80 | 0.73,0.23,0.1,5.76,3.26,1.59,0.13,0.01,0.02,3.39,0.06,0.35,0.12,3.06,1.14,0.09,0.07,0.17,0.0,0.0,0.0,0.0,0.0,0.90,0.41,0.13,1.05 ... | 6932051 | 4169 |
| 1 | 202012385 | 202043556 | UPK1B | 555 | . | UPK1B | 80 | 61.85,29.96,29.16,32.69,22.01,5.18,18.88,2.85,0.36,0.83,0.81,4.84,0.16,0.77,0.43,4.5,0.48,0.28,0.03,0.00,0.0,0.16,0.1,1.42,0.7,0 ... | 6936220 | 4255 |
| 1 | 202045827 | 202047482 | LOC101117816 | 222 | . | LOC101117816 | 80 | 0.0,0.0,0.0,0.0,0.0,0.0,0.08,0.0,0.0,0.46,1.72,0.0,0.0,0.11,1.0,0.07,0.0,0.0,0.76,0.0,0.0,1.4,0.0,0.0,0.0,1.86,0.62,0.78,0.37,1. ... | 6940475 | 4173 |
| 1 | 202053942 | 202081675 | B4GALT4 | 666 | . | B4GALT4 | 80 | 41.11,13.96,15.41,21.49,10.68,39.38,17.1,8.99,5.82,2.6,4.23,7.48,4.09,4.47,8.48,4.91,4.15,4.44,1.81,1.67,2.67,4.8,5.54,5.64,4.84 ... | 6944648 | 4300 |
| 1 | 202113614 | 202235367 | ARHGAP31 | 555 | . | ARHGAP31 | 80 | 1.57,4.11,4.82,13.03,10.68,76.01,8.52,6.91,4.57,1.23,1.77,4.96,2.65,1.47,15.09,3.48,3.74,10.32,5.48,9.76,9.81,5.36,5.38,4.46,5.7 ... | 6948948 | 4253 |
| 1 | 202241083 | 202270803 | TMEM39A | 777 | . | TMEM39A | 80 | 13.06,17.11,18.29,20.0,14.96,11.77,19.36,17.19,13.64,8.79,18.48,17.35,12.74,5.78,19.45,11.92,11.14,13.58,10.64,6.58,6.95,9.75,17 ... | 6953201 | 4575 |
| 1 | 202274620 | 202304627 | POGLUT1 | 555 | . | POGLUT1 | 80 | 3.36,10.14,8.67,5.43,5.33,11.15,6.18,4.7,4.74,3.42,2.55,2.37,4.33,3.50,4.93,4.69,6.13,8.35,4.09,3.34,4.14,5.84,4.11,5.23,5.94,11 ... | 6957776 | 4196 |
| 1 | 202304712 | 202307714 | LOC105607786 | 333 | . | LOC105607786 | 80 | 1.08,1.54,0.90,1.36,0.95,1.0,1.29,0.74,0.65,1.02,0.70,0.42,1.18,0.87,1.09,0.6,0.67,0.66,0.43,0.48,0.35,1.47,0.57,0.71,1.14,1.42, ... | 6961972 | 4174 |
| 1 | 202307856 | 202328607 | TIMMDC1 | 555 | . | TIMMDC1 | 80 | 5.11,3.25,4.03,4.33,2.94,3.66,5.07,4.35,4.5,3.30,5.14,3.33,3.48,4.20,6.3,2.83,3.17,2.97,2.89,2.72,2.77,4.09,3.08,3.43,3.89,3.64, ... | 6966146 | 4173 |
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