Schema for pan-sequences Genes - pan-sequences Gene Predictions

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Schema for pan-sequences Genes - pan-sequences Gene Predictions

Database: panPig Primary Table: novelAnno Row Count: 12,186 Data last updated: 2018-01-15

field	example	SQL type	info
`bin`	585	`smallint(5) unsigned`	range
`chrom`	P	`varchar(255)`	values
`chromStart`	410	`int(10) unsigned`	range
`chromEnd`	756	`int(10) unsigned`	range
`name`	FAM227B	`varchar(255)`	values

Sample Rows

bin	chrom	chromStart	chromEnd	name
585	P	410	756	FAM227B
585	P	2299	2550	MCM8
585	P	7574	7910	LOC100525572
585	P	11016	11334	LOC102167067
585	P	12683	13095	LOC110261249
585	P	14834	15126	SPO11
585	P	16502	16720	SNAP29
585	P	18315	18677	MFSD4A
585	P	32697	32836	LOC102158214
585	P	35517	35901	ARHGAP28

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.