Schema for NCBI Genes - NCBI Gene Predictions |
|---|
| |
Database: wheat Primary Table: wheat_NCBI_Genes Data last updated: 2020-08-04
Big Bed File: /gbdb/wheat/gene/wheat.gene.bb
Item Count: 137,056
Format description: Genes for wheat_new with Transcript and GeneSymbol
| field | example | description |
|---|
| chrom | 1A | Reference sequence chromosome or scaffold(iwgsc_refseqv1.0:GCA_900519105.1) | | chromStart | 396100632 | Start position in chromosome | | chromEnd | 396102564 | End position in chromosome | | name | TraesCS1A01G225600.1 | Name of transcript | | score | 0 | Score from 0-1000 | | strand | + | + or - for strand | | thickStart | 396100632 | Start of where display should be thick (start codon) | | thickEnd | 396102564 | End of where display should be thick (stop codon) | | reserved | 0 | Used as itemRgb as of 2004-11-22 | | blockCount | 1 | Number of exon | | blockSizes | 1932, | Comma separated list of exon sizes | | chromStarts | 0, | Start positions relative to chromStart | | geneSymbol | TraesCS1A01G225600 | Gene Symbol | | searchText | TraesCS1A01G225600.1(TraesCS1A01G225600) | Search Text |
|
| |
|
|
|
Sample Rows
|
|---|
| |
| chrom | chromStart | chromEnd | name | score | strand | thickStart | thickEnd | reserved | blockCount | blockSizes | chromStarts | geneSymbol | searchText |
|---|
| 1A | 396100632 | 396102564 | TraesCS1A01G225600.1 | 0 | + | 396100632 | 396102564 | 0 | 1 | 1932, | 0, | TraesCS1A01G225600 | TraesCS1A01G225600.1(TraesCS1A01G225600) |
| 1A | 396105315 | 396108015 | TraesCS1A01G225700.1 | 0 | - | 396105315 | 396108015 | 0 | 7 | 69,111,84,127,68,72,153, | 0,159,389,591,1733,2337,2547, | TraesCS1A01G225700 | TraesCS1A01G225700.1(TraesCS1A01G225700) |
| 1A | 396262346 | 396262781 | TraesCS1A01G225800.1 | 0 | + | 396262415 | 396262722 | 0 | 2 | 122,228, | 0,207, | TraesCS1A01G225800 | TraesCS1A01G225800.1(TraesCS1A01G225800) |
| 1A | 396283079 | 396287461 | TraesCS1A01G225900.1 | 0 | + | 396283151 | 396286113 | 0 | 4 | 125,110,64,1520, | 0,215,2714,2862, | TraesCS1A01G225900 | TraesCS1A01G225900.1(TraesCS1A01G225900) |
| 1A | 396296938 | 396298571 | TraesCS1A01G226000.1 | 0 | + | 396297059 | 396298359 | 0 | 4 | 194,143,616,343, | 0,311,540,1290, | TraesCS1A01G226000 | TraesCS1A01G226000.1(TraesCS1A01G226000) |
| 1A | 396421636 | 396424425 | TraesCS1A01G226100.1 | 0 | + | 396421636 | 396424425 | 0 | 2 | 527,1030, | 0,1759, | TraesCS1A01G226100 | TraesCS1A01G226100.1(TraesCS1A01G226100) |
| 1A | 396425565 | 396426525 | TraesCS1A01G226200.1 | 0 | + | 396425565 | 396426525 | 0 | 3 | 88,56,471, | 0,189,489, | TraesCS1A01G226200 | TraesCS1A01G226200.1(TraesCS1A01G226200) |
| 1A | 396428234 | 396432110 | TraesCS1A01G226300.1 | 0 | - | 396428234 | 396432110 | 0 | 9 | 252,95,89,98,107,49,107,96,127, | 0,378,601,798,1207,1420,1599,3545,3749, | TraesCS1A01G226300 | TraesCS1A01G226300.1(TraesCS1A01G226300) |
| 1A | 396428234 | 396432110 | TraesCS1A01G226300.2 | 0 | - | 396428234 | 396432110 | 0 | 9 | 252,95,89,98,110,49,107,96,127, | 0,378,601,798,1207,1420,1599,3545,3749, | TraesCS1A01G226300 | TraesCS1A01G226300.2(TraesCS1A01G226300) |
| 1A | 396439815 | 396452357 | TraesCS1A01G226400.1 | 0 | + | 396439815 | 396452357 | 0 | 13 | 156,78,110,93,173,89,75,111,111,120,173,53,548, | 0,246,402,1140,1427,1692,2386,10428,11002,11234,11449,11872,11994, | TraesCS1A01G226400 | TraesCS1A01G226400.1(TraesCS1A01G226400) |
|
| |
|
|
|