Schema for Gap - Gap Location

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Schema for Gap - Gap Location

Database: wheat_V2 Primary Table: gap Row Count: 693,028 Data last updated: 2020-08-08

field	example	SQL type
`bin`	585	`smallint(6)`
`chrom`	1A	`varchar(255)`
`chromStart`	2176	`int(10) unsigned`
`chromEnd`	3362	`int(10) unsigned`
`ix`	2	`int(11)`
`n`	N	`char(1)`
`size`	1186	`int(10) unsigned`
`type`	contig	`varchar(255)`
`bridge`	yes	`varchar(255)`

Sample Rows

bin	chrom	chromStart	chromEnd	ix	n	size	type	bridge
585	1A	2176	3362	2	N	1186	contig	yes
585	1A	17308	18396	4	N	1088	contig	yes
585	1A	26329	26802	6	N	473	contig	yes
585	1A	34714	35573	8	N	859	contig	yes
585	1A	43284	44122	10	N	838	contig	yes
585	1A	52063	52817	12	N	754	contig	yes
585	1A	53128	53140	14	N	12	contig	yes
585	1A	61047	61378	16	N	331	contig	yes
585	1A	72391	72755	18	N	364	contig	yes
585	1A	89728	90505	20	N	777	contig	yes

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.