Schema for Gap - Gap Location

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Schema for Gap - Gap Location

Database: Btau_5_0_1 Primary Table: gap Row Count: 41,517 Data last updated: 2021-08-04

field	example	SQL type	info
`bin`	585	`smallint(6)`	range
`chrom`	1	`varchar(255)`	values
`chromStart`	17214	`int(10) unsigned`	range
`chromEnd`	17314	`int(10) unsigned`	range
`ix`	2	`int(11)`	range
`n`	N	`char(1)`	values
`size`	100	`int(10) unsigned`	range
`type`	contig	`varchar(255)`	values
`bridge`	yes	`varchar(255)`	values

Sample Rows

bin	chrom	chromStart	chromEnd	ix	n	size	type	bridge
585	1	17214	17314	2	N	100	contig	yes
585	1	25273	25373	4	N	100	contig	yes
585	1	39630	39730	6	N	100	contig	yes
585	1	55411	55511	8	N	100	contig	yes
585	1	63329	63429	10	N	100	contig	yes
585	1	74840	74940	12	N	100	contig	yes
585	1	76273	76373	14	N	100	contig	yes
585	1	77844	77944	16	N	100	contig	yes
585	1	79816	79916	18	N	100	contig	yes
586	1	202638	202738	20	N	100	contig	yes

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.