Schema for expreBar - 429samplesExpreBar
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Database: GRCg6a Primary Table: expreBar Data last updated: 2022-04-06
Big Bed File: /gbdb/GRCg6a/trans/New/output.bigBed Item Count: 23,843
Format description: Tissue expreBar
field | example | description |
chrom | 1 | Reference sequence chromosome or scaffold | chromStart | 131681532 | Start position of feature on chromosome | chromEnd | 131745200 | End position of feature on chromosome | name | CYFIP1 | Name of transcript | score | 999 | Score | strand | . | + or - for strand | name2 | CYFIP1 | Name of gene | expCount | 100 | Number of tissues | expScores | 125.33,31.33,32.95,31.11,5.03,5.66,4.65,12.60,5.72,8.28,5.94,36.67,34.63,24.46,57.47,109.79,105.77,112.38,119.43,181.12,142.17,174.91,90.44,98.29,113.71,85.41,100.03,105.84,85.03,155.17,79.42,104.73,73.97,4.90,2.37,72.28,69.72,21.09,22.55,18.77,19.06,64.81,24.26,66.40,53.48,64.53,78.81,13.26,67.96,42.25,61.08,46.98,34.86,103.18,71.63,31.53,97.82,212.21,65.37,89.40,115.77,64.98,124.95,25.66,174.33,54.71,22.41,33.81,22.87,6.2,67.39,60.27,44.88,37.00,50.31,58.30,61.31,72.58,115.61,101.87,155.16,71.25,47.67,87.00,90.88,153.88,222.59,204.04,193.86,42.24,68.89,60.98,91.98,80.46,245.21,51.51,142.7,160.02,143.46,103.56 | Comma separated list of median expression in TPM for each tissue. | _dataOffset | 7552130 | Offset of sample data in data matrix file | _dataLen | 2671 | Length of sample data row in data matrix file |
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Sample Rows
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chrom | chromStart | chromEnd | name | score | strand | name2 | expCount | expScores | _dataOffset | _dataLen |
1 | 131681532 | 131745200 | CYFIP1 | 999 | . | CYFIP1 | 100 | 125.33,31.33,32.95,31.11,5.03,5.66,4.65,12.60,5.72,8.28,5.94,36.67,34.63,24.46,57.47,109.79,105.77,112.38,119.43,181.12,142.17,1 ... | 7552130 | 2671 |
1 | 131746787 | 131757836 | NIPA2 | 777 | . | NIPA2 | 100 | 29.29,11.58,21.72,20.12,9.12,15.42,12.59,10.62,7.98,10.97,12.03,22.50,19.43,19.69,39.32,28.51,24.56,33.12,28.03,16.92,22.83,17.6 ... | 39706011 | 2555 |
1 | 131761289 | 131775936 | NIPA1 | 777 | . | NIPA1 | 100 | 21.34,5.38,4.27,3.14,3.28,1.96,2.33,3.10,1.53,2.40,2.91,9.16,5.24,5.1,12.43,31.55,29.16,21.23,20.14,13.75,16.95,12.89,12.58,11.3 ... | 39703547 | 2464 |
1 | 131796740 | 131802824 | LOC107051964 | 111 | . | LOC107051964 | 100 | 0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.01,0.0,0.0,0.0,0.0,0.04,0.0,0.0,0.06,0 ... | 21592116 | 2158 |
1 | 131806220 | 131911397 | HERC2 | 888 | . | HERC2 | 100 | 45.9,38.11,33.47,42.44,23.53,11.81,18.20,20.47,15.57,14.21,13.06,92.09,37.85,34.73,11.27,27.51,27.33,52.98,30.49,28.9,22.06,43.6 ... | 13659736 | 2659 |
1 | 131924919 | 132106250 | OCA2 | 444 | . | OCA2 | 100 | 0.17,0.10,0.05,0.03,0.04,0.04,0.03,0.03,0.03,0.02,0.00,0.66,0.04,0.01,3.75,0.25,0.11,2.29,2.35,0.48,0.80,0.28,4.57,3.42,9.48,5.7 ... | 40542636 | 2204 |
1 | 131934857 | 131937036 | LOC100858753 | 222 | . | LOC100858753 | 100 | 0.0,0.04,0.26,0.2,0.04,0.02,0.02,0.0,0.0,0.00,0.03,0.62,0.08,0.0,0.61,0.41,0.28,1.55,1.67,0.0,0.0,0.0,1.16,0.05,0.28,0.74,0.0,0. ... | 17167423 | 2165 |
1 | 132248239 | 132302518 | LOC112529963 | 222 | . | LOC112529963 | 100 | 0.05,0.06,0.06,0.05,0.03,0.02,0.02,0.07,0.01,0.01,0.02,0.12,0.03,0.07,1.82,0.09,0.08,1.12,0.7,0.03,0.05,0.01,0.49,0.61,0.60,0.34 ... | 27081101 | 2175 |
1 | 132328866 | 132328886 | MIR1805 | 0 | . | MIR1805 | 100 | 0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0, ... | 36964990 | 2153 |
1 | 132397255 | 132561457 | GABRG3 | 222 | . | GABRG3 | 100 | 0.06,0.09,0.11,0.14,0.04,0.06,0.0,0.16,0.00,0.0,0.1,0.07,0.06,0.0,1.30,0.13,0.0,1.86,0.79,0.0,0.24,0.03,0.57,1.01,0.70,0.23,0.46 ... | 11846676 | 2166 |
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