1. Sample information

refpanel-sample-info.xlsx  (92K)

2. SNPs, indels, and CNVs files

Chr1_phased_snp.vcf.gz  (1.2G)
Chr2_phased_snp.vcf.gz  (995M)
Chr3_phased_snp.vcf.gz  (876M)
Chr4_phased_snp.vcf.gz  (942M)
Chr5_phased_snp.vcf.gz  (885M)
Chr6_phased_snp.vcf.gz  (922M)
Chr7_phased_snp.vcf.gz  (801M)
Chr8_phased_snp.vcf.gz  (820M)
Chr9_phased_snp.vcf.gz  (784M)
Chr10_phased_snp.vcf.gz  (767M)
Chr11_phased_snp.vcf.gz  (778M)
Chr12_phased_snp.vcf.gz  (713M)
Chr13_phased_snp.vcf.gz  (601M)
Chr14_phased_snp.vcf.gz  (610M)
Chr15_phased_snp.vcf.gz  (693M)
Chr16_phased_snp.vcf.gz  (605M)
Chr17_phased_snp.vcf.gz  (575M)
Chr18_phased_snp.vcf.gz  (487M)
Chr19_phased_snp.vcf.gz  (459M)
Chr20_phased_snp.vcf.gz  (563M)
Chr21_phased_snp.vcf.gz  (521M)
Chr22_phased_snp.vcf.gz  (440M)
Chr23_phased_snp.vcf.gz  (492M)
Chr24_phased_snp.vcf.gz  (499M)
Chr25_phased_snp.vcf.gz  (335M)
Chr26_phased_snp.vcf.gz  (406M)
Chr27_phased_snp.vcf.gz  (388M)
Chr28_phased_snp.vcf.gz  (384M)
Chr29_phased_snp.vcf.gz  (499M)
ChrX_phased_snp.vcf.gz  (380M)

3. cited

• Zhuang,Z., Wang,A., Hu,H., Wang,L., Gong,M., Yang,Q., Liu,A., Li,R., Zhang,H., Zhang,Q., Shah,A. M., Wang,X., Wang,Y., Liu,Q., Gao,L., Zhang,Z., Wang,C., Ma,Y., Cai,Y., Jiang Y*The efficient phasing and imputation pipeline of low-coverage whole genome sequencing data using a high-quality and publicly available reference panel in cattle. Animal Research and One Health,1(1),4–16