Welcome to HGVD

welcome to Hgvd horse

Features

• Basic information of 432 cattle accessions.
• Variations including SNPs, indels and CNVs are provided in BGVD.
• We provide two ways to view variations, one is interactive tables and graphs and the other is Gbrowse format.
• We provide a parallel search for variations, such as dbSNP rsid, gene symbol, and genomic region in three versions of the bovine genome (ARS-UCD1.2, UMD3.1.1 and Btau 5.0.1).
• We provide allele frequency distribution pattern of each SNP or indel in 54 globally representative cattle breeds or six "core" cattle groups.
• We provide copy number distribution in 432 individuals representing 49 cattle populations.
• We provide selection scores for eight groups of European taurine, Eurasian taurine, East Asian taurine, Chinese indicine, Indian indicine, Africa taurine, Bos indicus and Bos taurus by using six statistical terms.
• We integrate variations, selection scores, gene annotation, QTL and conserved elements into Gbrowse to facilitate global presentation.