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Indels

Please enter a dbSNP ID, or a gene symbol, or a chromosome location for one of the Sscrofa.11.1 genome versions, to obtain SNP information and allele frequency distribution pattern in 61 globally representative pig breeds or six "core" pig groups.

Basic search

Gene symbol:   e.g., , ,

Or Chromosome location:   For Sscrofa.11.1, e.g., ,

Advanced search

Minor allele frequency   (range: 0-1)

Consequence type:

Transcript variant
  • Coding variant
    • Exon_loss_variant
    • Start_lost
    • Stop_lost
    • Stop_gained
    • Gene_fusion
    • Frameshift_variant
    • Conservative_inframe_deletion
    • Conservative_inframe_insertion
    • Disruptive_inframe_deletion
    • Disruptive_inframe_insertion
  • Non-coding variant
    • 5_prime_UTR_variant
    • 3_prime_UTR_variant
    • Intron_variant
    • Non_coding_transcript_exon_variant
  • Splice variant
    • Splice_acceptor_variant
    • Splice_donor_variant
    • Splice_region_variant
Intragenic variant
  • Intragenic_variant
Intergenic variant
  • Upstream_gene_variant
  • Downstream_gene_variant
  • Intergenic_variant