UCSC Genome Browser on ARS_UI_Ramb_v2_0 January 20th, 2018 Assembly (ARS_UI_Ramb_v2_0)
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1:1-3,000 3,000 bp.
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-   Mapping and Sequencing
Base Position
Gap
GC percent
Short Match
-   Genes and Gene Predictions
NCBI Genes
GWAS
QTL
-   Expression and Regulation
ATAC-seq_Peak(69)
CTCF_Peak(6)
H3K27ac_Peak(11)
H3K27Me3_Peak(6)
H3K4Me1_Peak(9)
H3K4Me3_Peak(22)
-   Comparative Genomics
Vertebrates phastCons
Vertebrates phyloP
-   Variation and Repeats
SNPs (5603)
Indels (5603)
-   Selection Statistics based on Population Differentiation
Fst_Africa Population(9)
Fst_Asia_Population(43)
Fst_Europe_Population(22)
Fst_Oceania_Population(4)
Fst_Wild Population(7)
-   Descriptive Statistics Descriptive Statistics Descriptive Statistics
Pi_Africa_Population(9)
Pi_Asia_Population(43)
Pi_Europe_Population(22)
Pi_Wild_Population(7)
-   Selection Statistics based on Linkage Disequilibrium Structure
iHS_Africa_Population(9)
iHS_Asia_Population(43)
iHS_Europe_Population(22)
iHS_Oceania_Population(4)
iHS_Wild_Population(7)
-   Selection Statistics based on Allele Frequency Spectrum
CLR_Africa_Population(9)
CLR_Asia_Population(43)
CLR_Europe_Population(22)
CLR_Oceania_Population(4)
CLR_Wild_Population(7)
TajimasD_Africa_Population(9)
TajimasD_Asia_Population(43)
TajimasD_Europe_Population(22)
TajimasD_Oceania_Population(4)
TajimasD_Wild Population(7)