Year: 2023

• Ran L#, Mian G#, Xinmiao Z#, ..., Shangquan G*, Jiang Y*.A sheep pangenome reveals the spectrum of structural variations and their effects on tail phenotypes. Genome Research (2023)(IF=7.000)
• Mingle D#, Ming L#, Zhouqing Z#, ... ,Jiang Y*. A missense mutation in RRM1 contributes to animal tameness. Science Advances (2023)(IF=13.600)
• Xuelei D#, Peipei B#,Dexiang H#, ..., Jiang Y*. A Chinese indicine pangenome reveals a wealth of novel structural variants introgressed from other Bos species. Genome Research (2023)(IF=7.000)

Year: 2022

• Li M#, Sun C#, Xu N#, ..., Hu X*, Jiang Y*, Yang N*. De Novo Assembly of 20 Chicken Genomes Reveals the Undetectable Phenomenon for Thousands of Core Genes on Microchromosomes and Subtelomeric Regions. Molecular Biology and Evolution (2022)(IF=8.800)
• Billah M#, Wang X#, Jiantao Yu#, Jiang Y*. Real-time goat face recognition using convolutional neural network. Computers and Electronics in Agriculture (2022)(IF=6.757)
• Shang Z#, Wang X#, Jiang Y*, Li Z*, Ning J*. Idenifying rumen protozoa in microscopic images of ruminant with improved YOLACT instance segmentation. Biosystems Engineering (2022)(IF=5.002)
• Cai D#, Zhu S#, Gong M#, ..., Jiang Y*. Radiocarbon and genomic evidence for the survival of Equus Sussemionus until the late Holocene. Elife (2022)(IF=8.713)
• Li A#, Yang Q#, Li R#, ..., Cai K*, Lei Y*, Jia K*, Jiang Y*, Zan L*. Chromosome-level Genome Assembly for Takin (Budorcas taxicolor) Provides Insights into Its Taxonomic Status and Genetic Diversity. Molecular Ecology (2022)(IF=6.622)
• Shen J#, Chen Q#, Zhang F#, ..., Jiang Y*, Lei C*. Genome-wide association study identifies quantitative trait loci affecting cattle temperament. Zoological Research (2022)(IF=6.975)
• Fu W#, Wang R#, Asadollahpour Nanaei H#, ..., Jiang Y*. RGD v2.0: a major update of the ruminant functional and evolutionary genomics database. Nucleic Acids Research (2022)(IF=19.160)
• Gong M#, Yang P#, Fang W#, ..., Jiang Y*. Building a cattle pan-genome using more de novo assemblies. Journal of Genetics and Genomics (2022)(IF=5.723)

• Wang F#, Shao J#, He S#, ..., Jiang Y*. Allele-specific expression and splicing provide insight into the phenotypic differences between thin- and fat-tailed sheep breeds. Journal of Genetics and Genomics (2022)(IF=5.723)
• Fu W#, Wang R#, Xu N#, ..., Jiang Y*. Galbase: a comprehensive repository for integrating chicken multi-omics data. BMC Genomics (2022)(IF=4.547)

Year: 2021

• Li J#, Zhang J#, Liu J#, ..., Jiang Y*, Zhou Z*, Zhang G*, Zhou Q*. A new duck genome reveals conserved and convergently evolved chromosome architectures of birds and mammals. Gigascience. (2021)(IF=7.658)
• Li R#, Yang P#, Dai X#,..., Wang X & Jiang Y*. A near complete genome for goat genetic and genomic research. Genetics Selection Evolution. (2021)(IF=5.100)
• Wang M#, Zhang J#, Guo X#, Jiang Y#,..., Bosse M*, Wu D*, Han J & Zhang Y*. Large-scale genomic analysis reveals the genetic cost of chicken domestication. BMC Biology (2021)(IF=7.364)
• Pan X#, lI Z#,..., Jiang Y*. Dynamics of rumen gene expression, microbiome colonization, and their interplay in goats. BMC Genomics (2021)(IF=4.547)
• Fu W#,..., Jiang Y*. GGVD: A goat genome variation database for tracking the dynamic evolutionary process of selective signatures and ancient introgressions. Journal of Genetics and Genomics (2021)(IF=5.723)
• Huang Y#, Li Y#, Wang X#,..., Jiang Y*. An atlas of CNV maps in cattle, goat and sheep. SCIENCE CHINA Life Sciences (2021)(IF=10.372)
• Li R#, Yang P#, Li M#,..., Jiang Y*. A Hu sheep genome with the first ovine Y chromosome reveal introgression history after sheep domestication. SCIENCE CHINA Life Sciences (2021)(IF=10.372)

Year: 2020

• Wang M#, Mukesh Thakur#, Peng M#, Jiang Y#,..., Wu D&Zhang Y*. 863 genomes reveal the origin and domestication of chicken. Cell Research (2020)(cover story,IF=46.297)
• Zheng Z#, Wang X# , Li M#,..., Chen Y*, Jiang Y*. The origin of domestication genes in goats. Science Advances (2020)(cover story,IF=14.957)
• Jiao F#, Lou R#, Dai X#,...,Qian Y*, Zhao A*, Jiang Y*. Chromosome-level reference genome and population genomic analysis provide insight into the evolution and improvement of domesticated mulberry (Morus alba L). Molecular Plant(2020)(IF=21.949)
• Cai Y#, Fu W#, Cai D#,..., Jiang Y*, Wang X*. Ancient genomes reveal the evolutionary history and origin of cashmere producing goats in China. Molecular Biology and Evolution (2020)(cover story,IF=8.800)
• Chen, N#, Fu W#, Zhao J#,..., Jiang, Y*. The Bovine Genome Variation Database (BGVD): Integrated Web-database for Bovine Sequencing Variations and Selective Signatures. Genomics, Proteomics & Bioinformatics (2020)(IF=6.409)
• Sun T#, Shen S#, Achilli A#,..., Jiang Y*, Lei C*. Genomic Analyses Reveal Distinct Genetic Architectures and Selective Pressures in Buffaloes. GigaScience (2020)(IF=7.658)
• Pan X#, Cai Y#, Li Z#,..., Wang W*, Jiang Y*. Modes of genetic adaptations underlying functional innovations in the rumen. SCIENCE CHINA Life Sciences (2020)(cover story,IF=10.372)
• Wang J#, Fu W#,..., Jiang Y*, Kang Z*. WGVD: an integrated web-database for wheat genome variation and selective signatures. Database-The Journal of Biological Databases and Curation(2020)(IF=4.462)

Year: 2019

• Chen L#, Qiu Q#, Jiang Y#,..., Heller R*, Wang W*. Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits. Science (2019)(cover story,IF=63.714)
• Wang Y#, Zhang C#, Wang N#,..., Jiang Y*,Wang W*, Q Qiang*. Genetic basis of ruminant headgear and rapid antler regeneration. Science (2019)(cover story,IF=63.714)
• Cheng H#，Liu J#，Wen J#,..., Song W*, Sun Q*, Jiang Y*. Frequent intra- and inter-species introgression shapes the landscape of genetic variation in bread wheat. Genome Biology (2019)(IF=17.906)
• Tian X#, Li R#, Fu W#,..., Li M, Jiang Y*. Building a sequence map of the pig pan-genome from multiple de novo assemblies and Hi-C data. SCIENCE CHINA Life Sciences (2019)(IF=10.372)
• Li R#, Tian, X#,..., Jiang Y*. Recovery of non-reference sequences missing from the human reference genome. BMC Genomics(2019)(IF=4.547)
• Cao Y#, Xu H#, Li R#,..., Luo J*, Jiang Y*. Genetic Basis of Phenotypic Differences Between Chinese Yunling Black Goats and Nubian Goats Revealed by Allele-Specific Expression in Their F1 Hybrids. Frontiers in Genetics (2019)(IF=4.772)
• Li R#, Fu W#,Su R#,...,Li J*, Jiang Y*. Towards the Complete Goat Pan-Genome by Recovering Missing Genomic Segments From the Reference Genome. Frontiers in Genetics(2019)(IF=4.772)
• Li C#, Li M#, Li X#,..., Jiang Y*，Hu S*. Whole-genome resequencing reveals loci associated with thoracic vertebrae number in sheep. Frontiers in Genetics (2019)(IF=4.772)
• Wang Y#, Gao S#, Zhao Y#,..., Jiang Y*. Allele-specific expression and alternative splicing in horse×donkey and cattle×yak hybrids. ZOOLOGICAL RESEARCH (2019)(cover story,IF=6.975)

Year: 2018

• Chen N#, Cai Y#, Chen Q#,..., Jiang Y*, Lei C*. Whole-genome resequencing reveals world-wide ancestry and multiple adaptive introgression events of domesticated cattle in East Asia. Nature communications (2018)(IF=17.694)
• Zhou Z#, Li M#, Cheng H#,..., Hou S*, Jiang Y*. An intercross population study reveals genes associated with body size and plumage color in ducks. Nature communications (2018)(IF=17.694)
• Wang X#, Liu J#, Niu Y#,..., Huang X, Jiang Y*, Chen Y*. Low incidence of SNVs and indels in trio genomes of Cas9-mediated multiplex edited sheep. BMC Genomics (2018)(IF=4.547)

Year: 2017

• Wang X#, Zheng Z#, Cai Y#,..., Jiang Y*. CNVcaller: Highly Efficient and Widely Applicable Software for Detecting Copy Number Variations in Large Populations. GigaScience (2017)(IF=7.658)
• Li M#, Zhou H#, Pan X#,..., Zi X, Jiang Y*. Cassava foliage affects the microbial diversity of Chinese indigenous geese caecum using 16S rRNA sequencing. Scientific Reports (2017)(IF=4.996)

Year: 2015

• Zhou Z#, Jiang Y#, Wang Z,..., Wang W*, Tian Z*. Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean. Nature Biotechnology (2015) (ESI Highly Cited Papers)(IF=68.164)
• Dong Y#, Zhang X#, Xie M#,..., Wang W*, Jiang Y*. Reference genome of wild goat (Capra aegagrus) and sequencing of goat breeds provide insight into genic basis of goat domestication. BMC Genomics (2015)(IF=4.547)
• Jiang Y#, Wang X#, Kijas J#, Dalrymple B#. Beta globin gene evolution in the ruminants: evidence for an ancient origin of sheep haplotype B. Animal Genetics (2015)(IF=2.884)
• Chen H#, Jiang Y*. Progress and Prospects in Domestic Animals and Breeding: a Review of Genomic Copy Number Variations. Biotechnology Bulletin (2015)(IF=1.932)

Year: 2014

• Jiang Y#, Xie M#, Chen W#,..., Wang W*, Brian P. Dalrymple*. The sheep genome illuminates biology of the rumen and lipid metabolism. Science (2014)(IF=63.714)

• Wen Wang, Northwestern Polytechnical University


• Zhengkui Zhou, Institute of Animal Sciences of Chinese Academy of Agricultural Sciences


• Mingzhou Li, Sichuan Agricultural University


• Mingjun Liu, Xinjiang Academy of Animal Sciences


• Yulin Chen, Northwest A&F University


• Chuzhao Lei, Northwest A&F University